on003478
NEMAR copy of ds003478

EEG: Depression rest

This dataset comprises resting-state EEG recordings from 122 college-age participants with varying levels of depressive symptoms as measured by the Beck Depression Inventory. Participants completed two 6-minute resting sessions with eyes-open and eyes-closed conditions, with the first session occurring immediately after EEG setup and the second following approximately one hour of task performance. The data were collected between 2008-2010 in the John J.B. Allen lab at the University of Arizona and include clinical interview information for a subset of participants. NOTE: Data quality considerations include potential HEOG/VEOG mislabeling for some subjects, some channels with prior interpolation, and limited review of the second rest run. Subject 516 is missing rest2 data, and subject 544 was excluded from analyses due to unstable BDI scores between assessment timepoints.

AI-generated description, may include mistakes
Issues GitHub OpenNeuro ds003478

Download this dataset

Pick a method. Large datasets skip the zip and use the streaming methods below — all resumable. Full download guide →

  1. Download archive (.zip) — 10.2 GB

    A single zip of the published version. Best for small/medium datasets.

    Download zip

  2. NEMAR CLI recommended

    Pulls the pinned version + annexed data and resumes cleanly. Install nemar-cli →

    nemar dataset download on003478
  3. DataLad

    Clone the dataset repo and fetch file content on demand. Docs →

    datalad clone https://github.com/nemarDatasets/on003478 on003478
    cd on003478 && datalad get .
  4. git-annex

    Plain git + git-annex against the dataset repo. Docs →

    git clone https://github.com/nemarDatasets/on003478 on003478
    cd on003478 && git annex get .
  5. Direct files (wget / curl / rclone)

    Every file with a stable, range-resumable URL from the manifest. Needs curl, jq, wget (or rclone/aria2c). Docs →

    curl -s https://data.nemar.org/on003478/v1.0.0/manifest.json | jq -r '.[].bytes_url' > urls.txt
    wget -xc -i urls.txt

Compute on this dataset

Two routes today, with a third (in-browser one-click submission) landing soon.

  1. NeuroScience Gateway (NSG) portal.

    NSG runs EEGLAB / Brainstorm / MNE pipelines on supercomputing time donated by SDSC. Create an account, point a job at this dataset's S3 prefix (s3://nemar/on003478), and submit.
    nsgportal.org →

  2. Local processing with nemar-cli.

    Pull the dataset to your machine and run any toolbox locally. Honors the published version pinning.

    npm install -g nemar-cli
    nemar dataset clone on003478
    cd on003478 && nemar dataset get
  3. Just the files.

    rclone, aria2c, or any HTTPS client works against data.nemar.org/on003478/ — the manifest carries presigned S3 URLs.

Direct compute access is coming soon. One-click NSG submission from this page is scoped for a follow-up phase. Tracked on nemarOrg/website#6.

Citations

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    Files

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