on003710
NEMAR copy of ds003710

APPLESEED Example Dataset

A longitudinal EEG dataset from 13 infants recorded at 4, 8, and 12 months of age, comprising 48 recording sessions. The dataset includes test-retest reliability assessments at 4 months (11 infants with complete longitudinal data, 2 infants with reliability data only) and was used to develop and validate APPLESEED, an automated preprocessing pipeline for estimating scale-wise entropy from pediatric EEG data. This example dataset accompanies the 2022 APPLESEED pipeline publication in Developmental Cognitive Neuroscience and demonstrates the application of entropy-based EEG analysis methods in early human development. The dataset is part of a larger longitudinal study initially described in Puglia et al. (2020).

EEG
Issues GitHub OpenNeuro ds003710

Download this dataset

Pick a method. Large datasets skip the zip and use the streaming methods below — all resumable. Full download guide →

  1. Download archive (.zip) — 9.0 GB

    A single zip of the published version. Best for small/medium datasets.

    Download zip

  2. NEMAR CLI recommended

    Pulls the pinned version + annexed data and resumes cleanly. Install nemar-cli → 

    nemar dataset download on003710
  3. DataLad

    Clone the dataset repo and fetch file content on demand. Docs → 

    datalad clone https://github.com/nemarDatasets/on003710 on003710
cd on003710 && datalad get .
  4. git-annex

    Plain git + git-annex against the dataset repo. Docs → 

    git clone https://github.com/nemarDatasets/on003710 on003710
cd on003710 && git annex get .
  5. Direct files (wget / curl / rclone)

    Every file with a stable, range-resumable URL from the manifest. Needs curl, jq, wget (or rclone/aria2c). Docs → 

    curl -s https://data.nemar.org/on003710/v1.0.0/manifest.json | jq -r '.[].bytes_url' > urls.txt
wget -xc -i urls.txt

Compute on this dataset

Two routes today, with a third (in-browser one-click submission) landing soon.

  1. NeuroScience Gateway (NSG) portal.

    NSG runs EEGLAB / Brainstorm / MNE pipelines on supercomputing time donated by SDSC. Create an account, point a job at this dataset's S3 prefix (s3://nemar/on003710), and submit.
    nsgportal.org →

  2. Local processing with nemar-cli.

    Pull the dataset to your machine and run any toolbox locally. Honors the published version pinning. 

    npm install -g nemar-cli
nemar dataset clone on003710
cd on003710 && nemar dataset get
  3. Just the files.

    rclone, aria2c, or any HTTPS client works against data.nemar.org/on003710/ — the manifest carries presigned S3 URLs.

Direct compute access is coming soon. One-click NSG submission from this page is scoped for a follow-up phase. Tracked on nemarOrg/website#6.

Citations

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    Files

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