on005963
NEMAR copy of ds005963

FRESH Motor Dataset

The FRESH Motor Dataset is a functional near-infrared spectroscopy (fNIRS) neuroimaging dataset focused on motor cortex activity during motor tasks. This dataset contains raw fNIRS measurements organized according to the Brain Imaging Data Structure (BIDS) standard and is hosted on NEMAR as a mirror of the OpenNeuro dataset (ds005963). The data is suitable for research on motor cortex hemodynamics, neurovascular coupling, and motor control mechanisms. Data are provided in SNIRF format with complete acquisition parameters and participant information.

AI-generated description, may include mistakes
Issues GitHub OpenNeuro ds005963

Download this dataset

Pick a method. Large datasets skip the zip and use the streaming methods below — all resumable. Full download guide →

  1. Download archive (.zip) — 0.2 GB

    A single zip of the published version. Best for small/medium datasets.

    Download zip

  2. NEMAR CLI recommended

    Pulls the pinned version + annexed data and resumes cleanly. Install nemar-cli →

    nemar dataset download on005963
  3. DataLad

    Clone the dataset repo and fetch file content on demand. Docs →

    datalad clone https://github.com/nemarDatasets/on005963 on005963
    cd on005963 && datalad get .
  4. git-annex

    Plain git + git-annex against the dataset repo. Docs →

    git clone https://github.com/nemarDatasets/on005963 on005963
    cd on005963 && git annex get .
  5. Direct files (wget / curl / rclone)

    Every file with a stable, range-resumable URL from the manifest. Needs curl, jq, wget (or rclone/aria2c). Docs →

    curl -s https://data.nemar.org/on005963/v1.0.0/manifest.json | jq -r '.[].bytes_url' > urls.txt
    wget -xc -i urls.txt

Compute on this dataset

Two routes today, with a third (in-browser one-click submission) landing soon.

  1. NeuroScience Gateway (NSG) portal.

    NSG runs EEGLAB / Brainstorm / MNE pipelines on supercomputing time donated by SDSC. Create an account, point a job at this dataset's S3 prefix (s3://nemar/on005963), and submit.
    nsgportal.org →

  2. Local processing with nemar-cli.

    Pull the dataset to your machine and run any toolbox locally. Honors the published version pinning.

    npm install -g nemar-cli
    nemar dataset clone on005963
    cd on005963 && nemar dataset get
  3. Just the files.

    rclone, aria2c, or any HTTPS client works against data.nemar.org/on005963/ — the manifest carries presigned S3 URLs.

Direct compute access is coming soon. One-click NSG submission from this page is scoped for a follow-up phase. Tracked on nemarOrg/website#6.

Citations

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    Files

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